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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S181_124V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S181_124V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S181_124V6.1Predicted protein (783 aa)    
Predicted Functional Partners:
PP1S281_108V6.1
annotation not available (1167 aa)
     
  0.995
PP1S171_148V6.1
annotation not available (955 aa)
     
  0.995
PP1S59_293V6.1
annotation not available (1163 aa)
     
 
  0.990
PP1S59_281V6.1
annotation not available (1167 aa)
     
 
  0.990
PP1S171_149V6.1
annotation not available (174 aa)
     
 
  0.988
PP1S220_96V6.1
annotation not available (237 aa)
     
 
  0.966
PP1S30_364V6.1
annotation not available (525 aa)
     
 
  0.966
PP1S29_149V6.1
Predicted protein (754 aa)
     
 
0.949
PP1S220_95V6.1
Predicted protein (755 aa)
     
 
0.949
PP1S570_1V6.1
annotation not available (1074 aa)
     
 
0.948
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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