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STRINGSTRING
PP1S181_97V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S181_97V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S181_97V6.1Predicted protein (516 aa)    
Predicted Functional Partners:
PP1S219_74V6.1
Predicted protein (205 aa)
     
 
  0.991
PP1S177_14V6.2
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (184 aa)
     
 
  0.991
PP1S274_72V6.1
Predicted protein (903 aa)
     
 
  0.988
PP1S166_43V6.1
Predicted protein (1280 aa)
     
 
  0.988
PP1S30_135V6.1
Uncharacterized protein (630 aa)
   
 
  0.977
PP1S4_22V6.1
Predicted protein; Belongs to the protein kinase superfamily (1103 aa)
     
 
  0.967
PP1S309_58V6.1
Predicted protein; Belongs to the protein kinase superfamily (1173 aa)
     
 
  0.967
PP1S89_130V6.1
Predicted protein; Cyclin B;2 ; Belongs to the cyclin family (538 aa)
     
 
  0.963
PP1S271_10V6.1
Predicted protein; Cyclin B;1 ; Belongs to the cyclin family (503 aa)
     
 
  0.963
PP1S35_174V6.1
Predicted protein (2426 aa)
     
 
  0.948
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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