• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S182_60V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S182_60V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S182_60V6.1Predicted protein; Belongs to the small heat shock protein (HSP20) family (121 aa)    
Predicted Functional Partners:
PP1S300_55V6.1
Predicted protein; Belongs to the ClpA/ClpB family (908 aa)
   
 
  0.924
PP1S34_87V6.1
Predicted protein; Belongs to the heat shock protein 70 family (780 aa)
   
 
  0.593
PP1S160_85V6.2
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N- methyltransferase family (261 aa)
         
  0.575
PP1S70_261V6.1
Predicted protein (448 aa)
           
  0.452
PP1S35_319V6.1
Predicted protein (447 aa)
           
  0.452
PP1S188_63V6.1
Predicted protein (453 aa)
           
  0.452
PP1S112_267V6.1
Predicted protein (446 aa)
           
  0.452
PP1S6_158V6.2
annotation not available (463 aa)
   
 
  0.430
PP1S60_201V6.1
annotation not available (458 aa)
   
 
  0.430
PP1S368_19V6.1
annotation not available (603 aa)
   
 
  0.409
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (8%) [HD]