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PpIAA1b protein (Physcomitrella patens) - STRING interaction network
"PpIAA1b" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PpIAA1bPredicted protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations (503 aa)    
Predicted Functional Partners:
TIRA1
TIRA1 TIR1-like auxin receptor (570 aa)
       
  0.819
TIRA2
TIRA2 TIR1-like auxin receptor protein (571 aa)
       
  0.819
TLP1B
TLP1B TIR1-like auxin receptor protein (626 aa)
         
    0.800
TLP1A
TLP1A TIR1-like auxin receptor protein (693 aa)
         
    0.800
PP1S86_1V6.1
Predicted protein; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (833 aa)
       
 
  0.699
PP1S6_240V6.1
Annotation not available (805 aa)
       
 
  0.699
PP1S65_227V6.1
Annotation not available (937 aa)
       
 
  0.699
PP1S48_147V6.1
Annotation not available (886 aa)
       
 
  0.699
PP1S163_119V6.1
Auxin response factor ; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (887 aa)
       
 
  0.699
PP1S133_56V6.1
Predicted protein; Auxin response factors (ARFs) are transcriptional factors that binds specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (876 aa)
       
 
  0.699
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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