• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S188_11V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S188_11V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S188_11V6.1Predicted protein (328 aa)    
Predicted Functional Partners:
PP1S118_234V6.2
Predicted protein (502 aa)
   
   
  0.908
PP1S58_147V6.1
annotation not available (1356 aa)
         
  0.648
PP1S104_99V6.2
Predicted protein (751 aa)
     
      0.631
PP1S223_121V6.1
Predicted protein (293 aa)
   
   
  0.626
PP1S94_154V6.1
Predicted protein (321 aa)
     
   
  0.614
PP1S77_89V6.1
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family (873 aa)
           
  0.609
PP1S307_76V6.1
annotation not available (951 aa)
           
  0.609
PP1S168_82V6.1
Predicted protein (865 aa)
           
  0.609
PP1S138_42V6.1
annotation not available (639 aa)
   
 
  0.564
PP1S154_115V6.1
Predicted protein (657 aa)
   
   
  0.555
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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