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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S189_65V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S189_65V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S189_65V6.1annotation not available (846 aa)    
Predicted Functional Partners:
PP1S73_18V6.1
Predicted protein (742 aa)
     
        0.885
PP1S31_282V6.1
Mitochondrial pyruvate carrier; Mediates the uptake of pyruvate into mitochondria (107 aa)
     
        0.857
PP1S66_139V6.1
Predicted protein; Belongs to the class-I aminoacyl-tRNA synthetase family (640 aa)
       
      0.843
PP1S450_27V6.1
annotation not available (66 aa)
       
      0.843
PP1S55_131V6.1
Predicted protein (498 aa)
 
   
  0.694
PP1S19_295V6.1
Alpha-galactosidase (456 aa)
   
   
  0.664
PP1S80_41V6.1
Alpha-galactosidase (628 aa)
   
   
  0.634
PP1S99_248V6.1
Predicted protein (899 aa)
 
     
  0.632
PP1S114_165V6.1
Predicted protein (893 aa)
 
     
  0.626
PP1S1924_1V6.1
Predicted protein (1047 aa)
         
  0.595
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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