STRINGSTRING
PP1S18_147V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S18_147V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S18_147V6.1Annotation not available (566 aa)    
Predicted Functional Partners:
PP1S39_82V6.1
Predicted protein (474 aa)
     
 
  0.751
PP1S283_22V6.1
Predicted protein (531 aa)
     
 
  0.751
PP1S49_79V6.1
Annotation not available (335 aa)
     
 
  0.745
PP1S104_141V6.1
Predicted protein (821 aa)
       
 
  0.744
PP1S2_146V6.1
Predicted protein (204 aa)
       
      0.738
PP1S2_145V6.1
Annotation not available (391 aa)
       
      0.738
PP1S269_25V6.1
Predicted protein (616 aa)
       
      0.738
PP1S13_205V6.1
Predicted protein (501 aa)
       
      0.738
PP1S86_77V6.1
Predicted protein (779 aa)
   
   
  0.600
PP1S70_55V6.1
Predicted protein (441 aa)
   
   
  0.600
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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