STRINGSTRING
PINB protein (Physcomitrella patens) - STRING interaction network
"PINB" - Auxin efflux carrier component in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PINBAuxin efflux carrier component; May act as a component of the auxin efflux carrier (713 aa)    
Predicted Functional Partners:
MKN6
KNOX class 2 protein MKN6 (518 aa)
           
  0.681
SHI
Putative zinc finger protein (289 aa)
     
   
  0.680
PP1S167_70V6.1
annotation not available (341 aa)
           
  0.643
PpLFY2
FLORICAULA/LEAFY homolog 2; Predicted protein (349 aa)
           
  0.605
PPLFY1
FLORICAULA/LEAFY homolog 1; Predicted protein (348 aa)
           
  0.605
MKN4
KNOX class 1 protein, MKN4 (258 aa)
           
  0.603
MKN5
KNOX class 1 protein MKN5 (508 aa)
           
  0.602
MKN2
KNOX class 1 protein MKN2 (445 aa)
           
  0.601
ppabcb19
ATP-binding cassette transporter, subfamily B, member 19, group MDR/PGP protein PpABCB19 (589 aa)
     
 
  0.560
ppabcb17
ATP-binding cassette transporter, subfamily B, member 17, group ATM-like protein PpABCB17 (296 aa)
     
 
  0.560
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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