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STRINGSTRING
PP1S191_108V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S191_108V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S191_108V6.1Predicted protein; Belongs to the CTL (choline transporter-like) family (1006 aa)    
Predicted Functional Partners:
PP1S88_186V6.1
Predicted protein (1189 aa)
     
        0.885
PP1S81_123V6.1
Predicted protein (1194 aa)
     
        0.885
PP1S452_9V6.1
Predicted protein (289 aa)
     
        0.885
PP1S211_122V6.1
Predicted protein (316 aa)
     
        0.885
PP1S5_346V6.1
Predicted protein (108 aa)
     
        0.876
PP1S69_82V6.1
Predicted protein (776 aa)
     
        0.859
PP1S59_88V6.1
Uncharacterized protein; Belongs to the protein kinase superfamily (358 aa)
     
        0.859
PP1S36_202V6.1
annotation not available (66 aa)
     
        0.859
PP1S36_201V6.1
annotation not available (227 aa)
     
        0.859
PP1S26_103V6.1
Autophagy-related protein; Belongs to the ATG8 family (122 aa)
     
        0.780
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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