• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S191_66V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S191_66V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S191_66V6.1annotation not available (320 aa)    
Predicted Functional Partners:
PP1S150_16V6.1
Predicted protein (763 aa)
           
  0.690
PP1S190_71V6.1
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (234 aa)
     
 
  0.655
PP1S79_112V6.1
Predicted protein (331 aa)
           
  0.637
PP1S62_223V6.1
annotation not available (340 aa)
           
  0.637
PP1S41_53V6.1
annotation not available (518 aa)
           
  0.600
PP1S263_81V6.1
annotation not available (1220 aa)
     
 
  0.586
PP1S113_110V6.1
Predicted protein; Belongs to the PI3/PI4-kinase family (1208 aa)
     
 
  0.586
PP1S149_14V6.2
Mediator of RNA polymerase II transcription subunit 31; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (187 aa)
     
   
  0.549
PP1S66_140V6.1
Diphthamide biosynthesis protein 1 (487 aa)
     
   
  0.527
PP1S35_287V6.1
annotation not available (556 aa)
     
   
  0.527
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]