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STRINGSTRING
PP1S191_78V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S191_78V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S191_78V6.1annotation not available (575 aa)    
Predicted Functional Partners:
PP1S76_13V6.1
annotation not available (643 aa)
     
 
  0.997
PP1S226_21V6.1
Predicted protein (229 aa)
   
 
  0.990
PP1S101_224V6.1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (466 aa)
   
 
  0.985
PP1S30_137V6.1
Uncharacterized protein (804 aa)
     
   
  0.983
PP1S55_251V6.1
Predicted protein (208 aa)
     
   
  0.943
PP1S316_6V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
       
 
  0.939
PP1S271_98V6.1
Predicted protein; Belongs to the universal ribosomal protein uS11 family (151 aa)
       
 
  0.939
PP1S40_20V6.1
Predicted protein (478 aa)
     
 
0.930
PP1S312_57V6.1
annotation not available (1506 aa)
     
 
  0.918
PP1S29_180V6.1
annotation not available (603 aa)
     
   
  0.916
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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