• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S193_26V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S193_26V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S193_26V6.1Predicted protein (452 aa)    
Predicted Functional Partners:
PP1S86_224V6.1
Predicted protein (1928 aa)
     
 
  0.945
PP1S187_24V6.1
Predicted protein (134 aa)
     
 
  0.945
PP1S119_119V6.1
annotation not available (1881 aa)
     
 
  0.945
PP1S83_183V6.1
Predicted protein (297 aa)
     
 
  0.875
PP1S70_117V6.1
Predicted protein (619 aa)
     
 
  0.875
PP1S201_54V6.1
Predicted protein (185 aa)
     
 
  0.875
PP1S32_218V6.1
annotation not available (275 aa)
           
  0.775
PP1S52_162V6.1
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (307 aa)
         
  0.683
PP1S336_13V6.1
annotation not available (338 aa)
         
  0.683
PP1S458_4V6.1
Predicted protein (1095 aa)
     
 
  0.656
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (12%) [HD]