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HAC1501 protein (Physcomitrella patens) - STRING interaction network
"HAC1501" - p300/CBP acetyltransferase-related protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HAC1501p300/CBP acetyltransferase-related protein (1866 aa)    
Predicted Functional Partners:
PP1S29_169V6.1
DNA-directed RNA polymerase (665 aa)
     
 
    0.726
PP1S458_4V6.1
Predicted protein (1095 aa)
     
 
    0.548
PP1S203_55V6.1
Predicted protein (1089 aa)
     
 
    0.548
PP1S3_646V6.1
Annotation not available (1055 aa)
     
 
    0.539
PP1S84_245V6.1
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1185 aa)
     
 
    0.538
PP1S1_770V6.1
Predicted protein (462 aa)
     
 
    0.536
PP1S475_13V6.1
Predicted protein (1396 aa)
     
 
    0.527
PP1S145_26V6.1
Predicted protein (750 aa)
         
    0.527
PP1S2991_1V6.1
Predicted protein (270 aa)
         
    0.518
PP1S177_124V6.1
Predicted protein (734 aa)
         
    0.518
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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