STRINGSTRING
PP1S194_136V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S194_136V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S194_136V6.1annotation not available (419 aa)    
Predicted Functional Partners:
PP1S448_14V6.1
Predicted protein (950 aa)
     
 
  0.926
PP1S233_110V6.1
Predicted protein (534 aa)
     
 
  0.926
PP1S154_94V6.1
Predicted protein (904 aa)
     
 
  0.926
PP1S127_49V6.1
Predicted protein (537 aa)
     
 
0.880
PP1S641_1V6.1
Predicted protein (807 aa)
     
      0.850
PP1S213_95V6.1
annotation not available (308 aa)
     
 
  0.837
PP1S220_98V6.1
annotation not available (599 aa)
     
 
  0.755
PP1S100_146V6.1
Polycomb group protein (999 aa)
     
 
  0.726
PP1S15_286V6.2
Ubiquitin carboxyl-terminal hydrolase (342 aa)
       
 
  0.653
PP1S33_371V6.1
annotation not available (729 aa)
       
 
  0.643
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (6%) [HD]