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STRINGSTRING
PP1S194_144V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S194_144V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S194_144V6.1Predicted protein (562 aa)    
Predicted Functional Partners:
PP1S197_43V6.1
Predicted protein (120 aa)
     
 
  0.922
PP1S407_2V6.1
Predicted protein (416 aa)
   
        0.885
PP1S70_135V6.1
Predicted protein (486 aa)
       
 
  0.877
PP1S29_309V6.1
Predicted protein (736 aa)
   
 
  0.870
PP1S17_383V6.1
Predicted protein (450 aa)
     
 
  0.870
PP1S61_42V6.1
Predicted protein (1457 aa)
     
 
  0.863
PP1S197_75V6.1
Predicted protein (677 aa)
     
 
  0.828
SWDB1502
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
     
 
  0.807
SWDB1501
Histone H3 methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 (328 aa)
     
 
  0.807
PP1S5_292V6.2
Predicted protein (232 aa)
   
 
  0.804
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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