STRINGSTRING
PP1S195_47V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S195_47V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S195_47V6.1Annotation not available (346 aa)    
Predicted Functional Partners:
PP1S301_8V6.1
Annotation not available (354 aa)
     
      0.929
PP1S165_48V6.1
Predicted protein (252 aa)
       
      0.848
PP1S543_12V6.1
Annotation not available (1058 aa)
     
        0.826
PP1S340_23V6.1
Predicted protein (109 aa)
     
        0.750
PP1S340_22V6.1
Predicted protein (291 aa)
     
        0.750
PP1S46_317V6.2
Predicted protein (490 aa)
     
        0.733
PP1S294_14V6.1
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (434 aa)
     
        0.721
PP1S318_64V6.1
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (558 aa)
     
      0.713
PP1S29_54V6.1
Predicted protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (558 aa)
     
      0.713
PP1S263_19V6.1
Predicted protein (641 aa)
     
        0.681
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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