STRINGSTRING
PP1S195_69V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S195_69V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S195_69V6.1Predicted protein (283 aa)    
Predicted Functional Partners:
PP1S333_36V6.1
Predicted protein (571 aa)
   
          0.457
PP1S261_25V6.1
Predicted protein (572 aa)
   
          0.457
PP1S227_41V6.1
Predicted protein (573 aa)
   
          0.457
PP1S32_177V6.1
Predicted protein (567 aa)
   
          0.456
PP1S279_35V6.1
Predicted protein (611 aa)
   
          0.452
PP1S15_44V6.1
Predicted protein (606 aa)
   
          0.452
PP1S313_22V6.1
Predicted protein (626 aa)
   
          0.451
PP1S245_40V6.1
Predicted protein (476 aa)
   
          0.451
PP1S149_171V6.1
Predicted protein; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (597 aa)
   
          0.416
PP1S277_10V6.3
Predicted protein; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7’ (588 aa)
   
          0.410
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (13%) [HD]