• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S196_114V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S196_114V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S196_114V6.1annotation not available (440 aa)    
Predicted Functional Partners:
PP1S88_186V6.1
Predicted protein (1189 aa)
   
        0.885
PP1S81_123V6.1
Predicted protein (1194 aa)
   
        0.885
PP1S160_96V6.1
Adenylyl cyclase-associated protein ; Belongs to the CAP family (512 aa)
     
        0.866
PP1S165_115V6.1
Predicted protein (389 aa)
         
  0.681
PP1S272_35V6.1
Predicted protein (231 aa)
           
  0.662
PP1S358_47V6.1
Predicted protein (440 aa)
     
   
  0.599
PP1S257_49V6.2
annotation not available (434 aa)
     
   
  0.599
PP1S137_96V6.3
Predicted protein (1399 aa)
         
  0.588
PP1S39_351V6.1
annotation not available (870 aa)
     
        0.554
PP1S2_272V6.1
Predicted protein (895 aa)
     
        0.554
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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