• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S197_133V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S197_133V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S197_133V6.1annotation not available (67 aa)    
Predicted Functional Partners:
PP1S40_9V6.1
Malate synthase ; Belongs to the malate synthase family (559 aa)
     
   
  0.931
PP1S60_266V6.1
Predicted protein (666 aa)
   
   
  0.801
PP1S1_815V6.1
Uncharacterized protein (664 aa)
   
   
  0.801
PP1S159_52V6.1
Predicted protein (664 aa)
   
   
  0.801
PP1S133_10V6.1
Predicted protein (668 aa)
   
   
  0.801
PP1S137_96V6.3
Predicted protein (1399 aa)
   
   
  0.678
PP1S291_43V6.1
Predicted protein (408 aa)
   
   
  0.595
PP1S25_208V6.1
Predicted protein (145 aa)
   
   
  0.595
PP1S159_68V6.3
Predicted protein (438 aa)
   
   
  0.595
PP1S177_117V6.1
Predicted protein (197 aa)
       
 
  0.568
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (10%) [HD]