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YKT6A1 protein (Physcomitrella patens) - STRING interaction network
"YKT6A1" - R-SNARE, YKT6-family in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YKT6A1R-SNARE, YKT6-family (200 aa)    
Predicted Functional Partners:
SYP3A1
Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type (357 aa)
     
  0.996
SYP3A2
Qa-SNARE, SYP3/Sed5p/Syntaxin 5-type (355 aa)
     
  0.996
GOS1B2
Qb-SNARE, GOS1/GS28-family; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (227 aa)
     
  0.996
GOS1A2
Qb-SNARE, GOS1/GS28-family; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (231 aa)
     
  0.996
GOS1B1
Qb-SNARE, GOS1/GS28-family; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (221 aa)
     
  0.996
GOS1A1
Qb-SNARE, GOS1/GS28-family; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (229 aa)
     
  0.996
SYP5A2
Qc-SNARE, SYP5 family (225 aa)
     
  0.994
PP1S232_54V6.1
Predicted protein (225 aa)
     
  0.994
SYP2A1
Qa-SNARE, SYP2/Pep12p/Syntaxin 7-type (262 aa)
     
  0.994
PP1S72_269V6.1
Predicted protein (87 aa)
     
  0.994
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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