• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S197_69V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S197_69V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S197_69V6.1annotation not available (236 aa)    
Predicted Functional Partners:
PP1S157_40V6.1
annotation not available (429 aa)
     
 
  0.902
PP1S14_133V6.1
Predicted protein (608 aa)
           
  0.887
PP1S14_371V6.1
ZIP family transporter (367 aa)
     
 
  0.839
PP1S144_44V6.5
ZIP family transporter (330 aa)
     
 
  0.839
PP1S225_20V6.1
annotation not available (380 aa)
     
 
  0.833
PP1S17_293V6.1
Predicted protein (357 aa)
     
 
  0.833
PP1S144_110V6.1
Predicted protein (336 aa)
     
 
  0.833
PP1S123_113V6.1
Predicted protein (156 aa)
     
 
  0.833
PP1S72_298V6.1
annotation not available (400 aa)
     
 
  0.803
PP1S19_181V6.1
annotation not available (342 aa)
     
 
  0.803
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]