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HIRA1501 protein (Physcomitrella patens) - STRING interaction network
"HIRA1501" - Histone transcription regulator HIRA in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HIRA1501Histone transcription regulator HIRA (1007 aa)    
Predicted Functional Partners:
SGA1502
Histone chaperone (239 aa)
     
  0.981
SGA1501
Histone chaperone (205 aa)
     
  0.981
SGA1504
Histone chaperone (207 aa)
     
  0.981
SGA1503
Histone chaperone (242 aa)
     
  0.981
HTR1501
Histone H3 (199 aa)
       
 
  0.825
PP1S96_114V6.1
Histone H3 (136 aa)
       
 
  0.825
HTR1516
Histone H3 (128 aa)
       
 
  0.825
PP1S540_5V6.1
Histone H3 (136 aa)
       
 
  0.825
PP1S410_38V6.1
Histone H3 (136 aa)
       
 
  0.825
HTR1510
Histone H3 (136 aa)
       
 
  0.825
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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