STRINGSTRING
PP1S198_1V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S198_1V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S198_1V6.1Predicted protein (723 aa)    
Predicted Functional Partners:
PP1S69_157V6.1
Patatin ; Lipolytic acyl hydrolase (LAH) (1344 aa)
           
  0.474
PP1S85_138V6.1
Predicted protein (551 aa)
           
  0.468
PP1S336_57V6.1
Predicted protein (693 aa)
           
  0.468
PP1S327_22V6.1
Predicted protein (643 aa)
           
  0.468
PP1S324_50V6.1
Predicted protein (577 aa)
           
  0.468
PP1S30_186V6.1
Predicted protein (500 aa)
           
  0.468
PP1S229_7V6.1
Predicted protein (540 aa)
           
  0.468
PP1S83_218V6.1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (110 aa)
           
  0.407
PP1S69_244V6.2
Predicted protein (372 aa)
           
  0.407
PP1S65_21V6.1
Predicted protein (398 aa)
           
  0.407
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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