STRINGSTRING
PP1S199_13V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S199_13V6.1" - Predicted protein in Physcomitrella patens
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S199_13V6.1Predicted protein (1937 aa)    
Predicted Functional Partners:
PP1S79_76V6.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (892 aa)
       
 
  0.641
Nia1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
       
 
  0.641
PP1S58_249V6.1
Predicted protein; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
       
 
  0.641
PP1S207_100V6.1
Predicted protein (434 aa)
       
      0.634
Rop4
Predicted proteinRop-family small GTPase (196 aa)
       
 
  0.557
Rop3
Rop-family small GTPase (196 aa)
       
 
  0.557
ROP2
Rop-family small GTPase (196 aa)
       
 
  0.557
PP1S126_126V6.1
Predicted proteinRop-family small GTPase (196 aa)
       
 
  0.557
PP1S41_59V6.1
Predicted protein (296 aa)
       
      0.554
PP1S215_63V6.1
Predicted protein (290 aa)
       
      0.554
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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