• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S199_36V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S199_36V6.1" - FACT complex subunit SSRP1 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S199_36V6.1FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (674 aa)    
Predicted Functional Partners:
GTC1501
FACT complex subunit (1060 aa)
     
 
  0.998
PP1S172_96V6.1
DNA helicase; Belongs to the MCM family (901 aa)
     
 
  0.992
PP1S35_109V6.1
Predicted protein; Belongs to the MCM family (809 aa)
     
 
  0.990
PP1S28_266V6.1
DNA helicase; Belongs to the MCM family (921 aa)
     
 
  0.990
PP1S503_12V6.1
Predicted protein (226 aa)
     
 
  0.973
PP1S355_49V6.1
DNA helicase; Belongs to the MCM family (727 aa)
     
 
  0.973
PP1S357_37V6.1
Predicted protein (775 aa)
     
 
  0.969
PP1S31_86V6.1
DNA helicase; Belongs to the MCM family (713 aa)
     
 
  0.961
PAFC1501
Paf1 complex protein (1019 aa)
     
 
  0.956
PP1S9_156V6.1
annotation not available (829 aa)
     
 
  0.956
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]