STRINGSTRING
BRWD1501 protein (Physcomitrella patens) - STRING interaction network
"BRWD1501" - Bromodomain and WD repeat domain-containing protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BRWD1501Bromodomain and WD repeat domain-containing protein (1943 aa)    
Predicted Functional Partners:
PP1S458_4V6.1
Predicted protein (1095 aa)
     
      0.924
PP1S203_55V6.1
Predicted protein (1089 aa)
     
      0.924
PP1S63_208V6.1
Predicted protein (333 aa)
       
      0.652
PP1S230_93V6.1
Predicted protein (333 aa)
       
      0.652
PP1S165_119V6.2
Predicted protein (333 aa)
       
      0.652
CK1a1
Predicted protein (434 aa)
       
      0.652
PP1S9_14V6.1
Annotation not available (53 aa)
     
 
    0.647
PP1S360_40V6.1
Annotation not available (61 aa)
     
 
    0.647
CHR1522
SWI/SNF class chromatin remodeling complex protein (2173 aa)
     
 
    0.647
CHR1520
SWI/SNF class chromatin remodeling complex protein (2426 aa)
     
 
    0.647
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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