STRINGSTRING
PP1S19_227V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S19_227V6.2" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S19_227V6.2Annotation not available (248 aa)    
Predicted Functional Partners:
PP1S114_90V6.1
Predicted protein (346 aa)
     
  0.981
PP1S31_215V6.1
Predicted protein (502 aa)
     
  0.980
PP1S257_84V6.1
30S ribosomal protein S15 (245 aa)
     
    0.980
rps2
30S ribosomal protein S2, chloroplastic (236 aa)
     
    0.978
PP1S337_11V6.1
Predicted protein (258 aa)
     
    0.971
PP1S199_88V6.1
Annotation not available (219 aa)
     
    0.971
PP1S128_49V6.1
Predicted protein (225 aa)
     
    0.971
PP1S90_155V6.1
Predicted protein (336 aa)
     
    0.970
PP1S38_249V6.2
Predicted protein (155 aa)
     
    0.969
PP1S1_179V6.1
Annotation not available (153 aa)
     
    0.969
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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