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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S19_227V6.2 protein (Physcomitrella patens) - STRING interaction network
"PP1S19_227V6.2" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S19_227V6.2annotation not available (248 aa)    
Predicted Functional Partners:
3989066
Predicted protein; Belongs to the universal ribosomal protein uL16 family (561 aa)
     
 
  0.999
PP1S114_90V6.1
Predicted protein; Belongs to the universal ribosomal protein uS5 family (346 aa)
     
 
  0.998
PP1S86_146V6.1
Predicted protein (106 aa)
     
 
  0.995
PP1S268_15V6.1
Predicted protein (90 aa)
     
 
  0.994
PP1S5_445V6.1
Predicted protein (281 aa)
     
 
  0.994
PP1S257_84V6.1
30S ribosomal protein S15 ; Belongs to the universal ribosomal protein uS15 family (245 aa)
     
 
  0.993
PP1S43_210V6.1
Predicted protein (119 aa)
     
      0.988
PP1S9_435V6.1
annotation not available (255 aa)
     
 
  0.983
PP1S88_135V6.1
Predicted protein (277 aa)
     
 
  0.983
PP1S212_78V6.1
Predicted protein; Belongs to the universal ribosomal protein uL15 family (263 aa)
     
 
  0.983
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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