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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S19_6V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S19_6V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S19_6V6.1annotation not available (338 aa)    
Predicted Functional Partners:
PP1S107_10V6.3
Predicted protein (115 aa)
     
        0.861
PP1S3930_2V6.1
Predicted protein (328 aa)
 
     
  0.729
PP1S130_196V6.1
Predicted protein (332 aa)
     
        0.707
PP1S25_365V6.1
Predicted protein (353 aa)
     
        0.670
PP1S123_144V6.1
Predicted protein (642 aa)
   
   
  0.640
PP1S260_17V6.4
Predicted protein (411 aa)
   
   
  0.638
PP1S1_158V6.1
Uncharacterized protein (339 aa)
   
   
  0.638
PP1S76_15V6.1
Predicted protein (397 aa)
         
  0.633
PP1S137_96V6.3
Predicted protein (1399 aa)
         
  0.632
PP1S72_215V6.1
Gluconokinase; Belongs to the gluconokinase GntK/GntV family (227 aa)
   
   
  0.631
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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