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PP1S1_202V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_202V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_202V6.1Uncharacterized protein (371 aa)    
Predicted Functional Partners:
PP1S106_134V6.1
Predicted protein (329 aa)
     
   
  0.963
PP1S86_217V6.1
Predicted protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family (504 aa)
     
   
  0.955
PP1S181_40V6.1
annotation not available (816 aa)
     
   
  0.953
PP1S84_173V6.1
Predicted protein (642 aa)
     
   
  0.951
PP1S277_64V6.1
annotation not available (835 aa)
     
   
  0.951
PP1S18_81V6.1
annotation not available (920 aa)
     
   
  0.950
PP1S159_80V6.1
Predicted protein (508 aa)
     
   
  0.947
PP1S201_92V6.1
Predicted protein (527 aa)
     
   
  0.946
PP1S93_182V6.1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1046 aa)
     
 
  0.944
PP1S53_169V6.1
Predicted protein (312 aa)
     
   
  0.942
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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