STRINGSTRING
PP1S1_207V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_207V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_207V6.1Predicted protein (188 aa)    
Predicted Functional Partners:
PP1S97_112V6.1
Predicted protein (475 aa)
     
 
  0.949
PP1S38_330V6.1
Predicted protein (531 aa)
     
 
  0.949
PP1S62_139V6.1
Annotation not available (420 aa)
     
 
  0.948
PP1S9_107V6.1
Annotation not available (394 aa)
     
 
  0.944
PP1S93_177V6.1
Predicted protein (423 aa)
     
 
  0.944
PP1S326_44V6.1
Predicted protein (397 aa)
     
 
  0.944
PP1S1_405V6.1
Predicted protein (394 aa)
     
 
  0.944
PP1S21_97V6.1
Predicted protein (352 aa)
     
 
  0.907
PP1S13_101V6.1
Predicted protein (387 aa)
     
 
  0.907
HPL1
Predicted protein (532 aa)
         
    0.900
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
Server load: low (6%) [HD]