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STRINGSTRING
PP1S1_254V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_254V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_254V6.1Uncharacterized protein (412 aa)    
Predicted Functional Partners:
PP1S77_324V6.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family (390 aa)
   
   
  0.680
PP1S23_281V6.1
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family (388 aa)
   
   
  0.680
PP1S260_17V6.4
Predicted protein (411 aa)
         
  0.651
PP1S1_158V6.1
Uncharacterized protein (339 aa)
         
  0.651
PP1S26_48V6.1
Predicted protein (371 aa)
         
  0.642
PP1S9287_1V6.1
Predicted protein (168 aa)
         
  0.634
PP1S2988_2V6.1
Predicted protein (278 aa)
         
  0.634
PP1S3023_2V6.1
Predicted protein (262 aa)
         
  0.634
PP1S459_8V6.2
Predicted protein (557 aa)
         
  0.618
PP1S449_13V6.2
Predicted protein; Belongs to the FGGY kinase family (308 aa)
         
  0.618
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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