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STRINGSTRING
PP1S1_327V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_327V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_327V6.1Uncharacterized protein (1007 aa)    
Predicted Functional Partners:
PP1S80_152V6.1
annotation not available (580 aa)
     
 
  0.536
PP1S42_35V6.1
annotation not available (579 aa)
     
 
  0.536
PP1S334_27V6.1
Predicted protein (380 aa)
           
  0.526
PP1S505_16V6.1
Predicted protein (229 aa)
           
  0.518
PP1S1_778V6.1
Uncharacterized protein (810 aa)
           
  0.515
PP1S84_243V6.3
Predicted protein (289 aa)
       
 
  0.511
PP1S59_152V6.2
Uncharacterized protein (243 aa)
       
 
  0.511
PP1S209_41V6.1
Predicted protein (283 aa)
       
 
  0.511
PP1S173_75V6.1
annotation not available (285 aa)
       
 
  0.511
PP1S7_388V6.1
annotation not available (578 aa)
           
  0.508
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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