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STRINGSTRING
PP1S1_416V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_416V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_416V6.1annotation not available (196 aa)    
Predicted Functional Partners:
PP1S8_63V6.1
Predicted protein; Belongs to the SNF7 family (204 aa)
     
  0.969
PP1S67_233V6.1
Predicted protein; Belongs to the SNF7 family (207 aa)
     
  0.969
PP1S40_174V6.1
Predicted protein; Belongs to the SNF7 family (207 aa)
     
  0.969
PP1S406_15V6.2
Predicted protein; Belongs to the SNF7 family (206 aa)
     
  0.969
PP1S96_36V6.1
annotation not available (218 aa)
     
 
  0.961
PP1S35_247V6.2
annotation not available (217 aa)
     
 
  0.961
PP1S287_65V6.1
annotation not available (217 aa)
     
 
  0.961
PP1S118_150V6.1
Predicted protein; Belongs to the SNF7 family (216 aa)
     
 
  0.961
PP1S76_197V6.1
Predicted protein; Belongs to the AAA ATPase family (442 aa)
     
 
  0.938
PP1S200_72V6.1
Predicted protein; Belongs to the AAA ATPase family (443 aa)
     
 
  0.938
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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