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STRINGSTRING
PP1S1_419V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_419V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_419V6.1Uncharacterized protein (390 aa)    
Predicted Functional Partners:
PP1S93_182V6.1
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)- acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation (1046 aa)
     
 
  0.964
PP1S66_289V6.1
Predicted protein (157 aa)
     
        0.885
PP1S641_1V6.1
Predicted protein (807 aa)
     
        0.885
PP1S347_32V6.2
Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation (650 aa)
     
        0.885
PP1S31_253V6.1
Predicted protein (308 aa)
     
        0.885
PP1S274_63V6.1
Predicted protein (343 aa)
     
        0.885
PP1S25_109V6.1
annotation not available (535 aa)
     
        0.885
PP1S234_26V6.1
Predicted protein (268 aa)
     
        0.885
PP1S217_34V6.1
Predicted protein (161 aa)
     
        0.885
PP1S1_202V6.1
Uncharacterized protein (371 aa)
     
        0.885
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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