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STRINGSTRING
PP1S1_542V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_542V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_542V6.1annotation not available (252 aa)    
Predicted Functional Partners:
PP1S366_17V6.1
Predicted protein; Belongs to the ubiquitin-conjugating enzyme family (245 aa)
           
  0.753
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2) (303 aa)
           
  0.610
PP1S245_12V6.1
Predicted protein (379 aa)
           
  0.530
PP1S49_283V6.1
Predicted protein (360 aa)
           
  0.529
PP1S152_153V6.1
Predicted protein (357 aa)
           
  0.529
PP1S134_177V6.1
Predicted protein (353 aa)
           
  0.529
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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