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STRINGSTRING
PP1S1_587V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_587V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_587V6.1Uncharacterized protein (484 aa)    
Predicted Functional Partners:
PP1S279_24V6.1
Predicted protein (138 aa)
     
 
  0.999
PP1S71_321V6.1
annotation not available (594 aa)
     
   
  0.778
PP1S519_13V6.1
annotation not available (570 aa)
     
   
  0.778
PP1S65_233V6.1
annotation not available (249 aa)
       
 
  0.771
PP1S44_187V6.1
annotation not available (147 aa)
           
  0.731
PP1S196_93V6.1
Predicted protein (167 aa)
           
  0.731
PP1S16_10V6.1
annotation not available (177 aa)
           
  0.731
PP1S137_142V6.1
annotation not available (126 aa)
           
  0.731
PP1S263_75V6.1
Predicted protein (156 aa)
     
   
  0.641
PP1S144_136V6.1
Predicted protein (158 aa)
     
   
  0.641
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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