• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S1_711V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_711V6.1" - Uncharacterized protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_711V6.1Uncharacterized protein (457 aa)    
Predicted Functional Partners:
PP1S882_1V6.1
Predicted protein (852 aa)
       
 
0.882
PP1S85_139V6.1
Predicted protein (891 aa)
       
 
0.881
PP1S324_56V6.1
Predicted protein (755 aa)
       
 
0.880
PP1S253_31V6.1
annotation not available (3553 aa)
       
 
  0.802
PP1S79_134V6.1
Predicted protein (495 aa)
           
  0.611
PP1S28_194V6.1
annotation not available (776 aa)
           
  0.595
PP1S6_357V6.1
Predicted protein (616 aa)
           
  0.593
PP1S186_11V6.1
Predicted protein (594 aa)
           
  0.593
PP1S105_41V6.3
annotation not available (254 aa)
           
  0.556
PP1S83_93V6.1
annotation not available (950 aa)
       
 
  0.537
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (9%) [HD]