• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S1_848V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S1_848V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S1_848V6.1annotation not available (268 aa)    
Predicted Functional Partners:
PP1S75_234V6.1
annotation not available (1142 aa)
           
  0.587
PP1S269_43V6.1
Predicted protein (1329 aa)
           
  0.587
PP1S43_55V6.2
Predicted protein (1046 aa)
           
  0.571
PP1S211_148V6.1
annotation not available (619 aa)
           
  0.566
PP1S20_328V6.1
annotation not available (867 aa)
       
      0.534
PP1S79_112V6.1
Predicted protein (331 aa)
           
  0.530
PP1S62_223V6.1
annotation not available (340 aa)
           
  0.530
PP1S190_71V6.1
CDP-diacylglycerol--inositol 3-phosphatidyltransferase (234 aa)
     
   
  0.526
PP1S68_26V6.1
Predicted protein (107 aa)
           
  0.525
PP1S68_24V6.1
Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (418 aa)
           
  0.525
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (14%) [HD]