• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S201_26V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S201_26V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S201_26V6.1Predicted protein (192 aa)    
Predicted Functional Partners:
PP1S13_127V6.2
Predicted protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (558 aa)
   
 
  0.742
PP1S116_56V6.2
Predicted protein; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (498 aa)
   
 
  0.742
PP1S153_74V6.1
Predicted protein (133 aa)
     
 
  0.640
PP1S79_76V6.2
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (892 aa)
   
 
  0.608
Nia1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.608
PP1S58_249V6.1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (891 aa)
   
 
  0.608
PP1S30_345V6.1
Uncharacterized protein (282 aa)
   
 
  0.607
PP1S257_45V6.1
annotation not available (138 aa)
   
 
  0.607
PP1S1139_3V6.1
Predicted protein (137 aa)
   
 
  0.607
PP1S313_13V6.1
annotation not available (622 aa)
   
 
  0.593
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (17%) [HD]