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STRINGSTRING
PP1S203_5V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S203_5V6.1" - Small hydrophobic protein 1 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S203_5V6.1Small hydrophobic protein 1 (59 aa)    
Predicted Functional Partners:
PP1S67_251V6.2
Predicted protein (451 aa)
       
 
  0.708
PP1S268_65V6.1
annotation not available (422 aa)
       
 
  0.708
PP1S205_47V6.1
annotation not available (1199 aa)
       
 
  0.708
PP1S148_98V6.1
annotation not available (1205 aa)
       
 
  0.708
PP1S212_67V6.1
Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins (186 aa)
           
  0.578
PP1S58_256V6.1
Predicted protein (452 aa)
           
  0.528
PP1S257_89V6.1
Predicted protein (452 aa)
           
  0.528
PP1S108_180V6.1
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication (227 aa)
           
  0.523
PP1S81_135V6.1
Predicted protein (192 aa)
           
  0.518
PP1S1_163V6.2
Uncharacterized protein (242 aa)
           
  0.518
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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