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STRINGSTRING
PP1S203_70V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S203_70V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S203_70V6.1Predicted protein (134 aa)    
Predicted Functional Partners:
PP1S426_43V6.1
Predicted protein (324 aa)
   
 
  0.964
PP1S85_84V6.1
Predicted protein (360 aa)
       
    0.914
PP1S425_16V6.2
Predicted protein (368 aa)
       
    0.914
PP1S458_12V6.2
Predicted protein (171 aa)
   
   
 
0.901
PP1S59_93V6.5
Uncharacterized protein (416 aa)
         
    0.900
PP1S399_34V6.1
Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family (421 aa)
     
 
  0.898
PP1S363_12V6.1
Predicted protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin- like GTPase superfamily. Era GTPase family (410 aa)
     
 
  0.898
PP1S88_44V6.1
Predicted protein (354 aa)
   
        0.883
PP1S64_38V6.1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (813 aa)
   
 
  0.835
PP1S195_46V6.1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (813 aa)
   
 
  0.835
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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