STRINGSTRING
PP1S203_89V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S203_89V6.1" - Annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S203_89V6.1Annotation not available (157 aa)    
Predicted Functional Partners:
PP1S396_8V6.1
Annotation not available (1069 aa)
     
 
  0.967
PP1S223_98V6.1
Predicted protein (837 aa)
     
 
  0.964
PP1S88_37V6.1
Annotation not available (1024 aa)
     
 
  0.963
VPS33
SM/Sec1-family protein (605 aa)
     
 
  0.962
PP1S53_164V6.1
Predicted protein (1109 aa)
     
 
  0.960
PP1S51_78V6.1
Annotation not available (1015 aa)
     
 
  0.960
PP1S229_38V6.1
Predicted protein (927 aa)
     
 
  0.940
SEC1A
SM/Sec1-family protein (675 aa)
     
 
  0.896
SEC1B
SM/Sec1-family protein (665 aa)
     
 
  0.896
SLY1PS
SM/Sec1-family protein-like protein (318 aa)
     
 
  0.884
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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