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PP1S204_93V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S204_93V6.1" - Ribulose bisphosphate carboxylase small chain in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S204_93V6.1Ribulose bisphosphate carboxylase small chain (184 aa)    
Predicted Functional Partners:
PP1S245_2V6.1
Predicted protein (338 aa)
 
   
  0.610
PP1S3_460V6.1
Ribulose-phosphate 3-epimerase (237 aa)
   
   
  0.571
PP1S39_426V6.2
Ribulose-phosphate 3-epimerase (287 aa)
   
   
  0.571
PP1S38_198V6.1
Predicted protein (295 aa)
   
   
  0.571
PP1S2_15V6.2
Ribulose-phosphate 3-epimerase (286 aa)
   
   
  0.571
PP1S137_96V6.1
Predicted protein (1399 aa)
         
  0.566
PP1S93_161V6.1
Predicted protein (332 aa)
 
   
  0.565
PP1S53_37V6.1
Predicted protein (204 aa)
   
   
  0.563
PP1S429_29V6.1
Predicted protein (396 aa)
   
   
  0.563
PP1S41_162V6.1
Predicted protein (394 aa)
   
   
  0.563
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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