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STRINGSTRING
PP1S206_92V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S206_92V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S206_92V6.1Predicted protein (475 aa)    
Predicted Functional Partners:
PP1S7_73V6.1
Uncharacterized protein; Belongs to the spermidine/spermine synthase family (341 aa)
   
 
  0.961
PP1S26_112V6.1
Predicted protein; Belongs to the spermidine/spermine synthase family (400 aa)
   
 
  0.961
PP1S244_74V6.1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (392 aa)
     
 
  0.949
PP1S244_70V6.1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (393 aa)
     
 
  0.949
ACL1
ACL1 AtACS-like ACC synthase (461 aa)
     
 
  0.947
PP1S4979_1V6.1
Arginase; Belongs to the arginase family (299 aa)
         
  0.669
PP1S52_118V6.1
Predicted protein; Cytosine-specific methyltransferase ; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (684 aa)
         
    0.650
PpMET1
DNA (cytosine-5)-methyltransferase; Cytosine-specific methyltransferase ; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family (1565 aa)
         
    0.650
PP1S117_71V6.1
annotation not available (942 aa)
         
    0.650
PP1S72_148V6.1
Predicted protein; Belongs to the arginase family (355 aa)
         
  0.645
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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