STRINGSTRING
PP1S206_97V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S206_97V6.1" - Predicted protein in Physcomitrella patens
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S206_97V6.1Predicted protein (397 aa)    
Predicted Functional Partners:
PP1S7_73V6.1
Predicted protein (341 aa)
     
 
  0.969
PP1S26_112V6.1
Predicted protein (400 aa)
     
 
  0.969
PP1S244_74V6.1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (392 aa)
     
 
  0.905
PP1S244_70V6.1
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (393 aa)
     
 
  0.905
PP1S52_118V6.1
Cytosine-specific methyltransferase (684 aa)
         
    0.900
ACL1
ACL1 AtACS-like ACC synthase (461 aa)
         
    0.900
PpMET1
Cytosine-specific methyltransferase (1565 aa)
         
    0.900
PP1S117_71V6.1
Annotation not available (942 aa)
         
    0.900
PP1S54_259V6.1
Predicted protein (343 aa)
     
 
  0.703
PP1S41_50V6.1
Predicted protein (355 aa)
     
 
  0.703
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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