• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S207_107V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S207_107V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S207_107V6.1annotation not available (492 aa)    
Predicted Functional Partners:
PP1S7_199V6.1
Uncharacterized protein (788 aa)
     
 
  0.824
PP1S62_236V6.5
annotation not available (420 aa)
   
   
  0.740
PP1S91_247V6.1
Malate dehydrogenase (345 aa)
   
 
  0.664
PP1S201_6V6.1
Malate dehydrogenase (347 aa)
   
 
  0.664
PP1S122_52V6.1
Malate dehydrogenase (389 aa)
   
 
  0.664
PP1S235_81V6.1
Malate dehydrogenase (333 aa)
   
 
  0.649
PP1S39_428V6.1
Malate dehydrogenase (361 aa)
   
 
  0.648
PP1S38_300V6.1
Malate dehydrogenase (361 aa)
   
 
  0.648
PP1S318_21V6.1
Pyruvate kinase ; Belongs to the pyruvate kinase family (591 aa)
   
 
  0.643
PP1S205_25V6.1
Pyruvate kinase ; Belongs to the pyruvate kinase family (596 aa)
   
 
  0.643
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (10%) [HD]