• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S207_28V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S207_28V6.1" - Obg-like ATPase 1 in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S207_28V6.1Obg-like ATPase 1; Hydrolyzes ATP, and can also hydrolyze GTP with lower efficiency. Has lower affinity for GTP (394 aa)    
Predicted Functional Partners:
PP1S71_218V6.1
annotation not available (308 aa)
   
 
  0.988
EF1Bgamma2
EF1Bgamma class glutathione S-transferase (428 aa)
   
 
  0.988
EF1Bgamma4
EF1Bgamma class glutathione S-transferase (428 aa)
   
 
  0.988
EF1Bgamma1
EF1Bgamma class glutathione S-transferase (432 aa)
   
 
  0.988
PP1S103_120V6.1
Predicted protein (429 aa)
     
   
  0.985
PP1S79_108V6.1
annotation not available (399 aa)
     
   
  0.985
PP1S17_382V6.1
annotation not available (329 aa)
           
  0.984
PP1S97_115V6.1
Uncharacterized protein (293 aa)
     
   
  0.930
PP1S38_329V6.2
Predicted protein (293 aa)
     
   
  0.930
PP1S371_31V6.2
Predicted protein (317 aa)
     
   
  0.930
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
Server load: low (11%) [HD]