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STRINGSTRING
PP1S207_6V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S207_6V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S207_6V6.1Predicted protein (836 aa)    
Predicted Functional Partners:
PP1S74_120V6.1
Predicted protein (2186 aa)
     
 
  0.999
PP1S62_85V6.1
annotation not available (523 aa)
     
 
  0.999
PP1S102_17V6.1
Predicted protein (617 aa)
     
 
  0.998
PP1S130_294V6.1
annotation not available (687 aa)
     
 
  0.998
PP1S45_24V6.1
Predicted protein (543 aa)
     
 
  0.998
PP1S52_170V6.1
Predicted protein (182 aa)
     
 
  0.998
PP1S101_224V6.1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly (466 aa)
     
 
  0.998
PP1S158_107V6.1
annotation not available (1339 aa)
     
 
  0.997
PP1S41_237V6.1
annotation not available (664 aa)
     
 
  0.997
PP1S370_18V6.1
Predicted protein (452 aa)
     
 
  0.996
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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