STRINGSTRING
PP1S207_81V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S207_81V6.1" - Predicted protein in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S207_81V6.1Predicted protein (322 aa)    
Predicted Functional Partners:
PP1S38_32V6.1
Predicted protein (330 aa)
   
   
 
0.802
PP1S72_214V6.1
Predicted protein (236 aa)
   
   
  0.706
PP1S33_65V6.1
Predicted protein (312 aa)
   
   
  0.706
PP1S259_86V6.1
Predicted protein (376 aa)
   
   
  0.706
PP1S230_8V6.1
Predicted protein (321 aa)
   
   
  0.706
PP1S11_48V6.1
Annotation not available (124 aa)
   
   
  0.706
PAFB1501
Paf1 complex protein (631 aa)
       
      0.652
PAFA1501
Paf1 complex protein (609 aa)
       
      0.638
PAFD1501
Paf1 complex protein (642 aa)
       
      0.637
PAFC1501
Paf1 complex protein (1019 aa)
       
      0.637
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: Bryophyta, Bryophytina, Bryopsida, Funariaceae, Funariales, Funariidae, Moss Superclass V, Musci, P. patens, Physcomitrella, Physcomitrella Bruch & Schimp, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt., bryophytes, mosses
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