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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
PP1S208_121V6.1 protein (Physcomitrella patens) - STRING interaction network
"PP1S208_121V6.1" - annotation not available in Physcomitrella patens
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP1S208_121V6.1annotation not available (90 aa)    
Predicted Functional Partners:
PP1S83_211V6.3
Protein disulfide-isomerase (525 aa)
     
 
  0.805
PP1S77_54V6.2
Predicted protein (567 aa)
     
 
  0.805
PP1S55_265V6.1
Predicted protein (440 aa)
     
 
  0.805
PP1S4_328V6.1
Predicted protein (603 aa)
     
 
  0.805
PP1S46_57V6.1
annotation not available (500 aa)
     
 
  0.805
PP1S46_56V6.1
Predicted protein (485 aa)
     
 
  0.805
PP1S433_7V6.1
annotation not available (159 aa)
     
 
  0.805
PP1S422_7V6.2
Protein disulfide-isomerase (572 aa)
     
 
  0.805
PP1S407_48V6.1
Protein disulfide-isomerase (513 aa)
     
 
  0.805
PP1S3_358V6.1
Predicted protein (557 aa)
     
 
  0.805
Your Current Organism:
Physcomitrella patens
NCBI taxonomy Id: 3218
Other names: P. patens, Physcomitrella patens, Physcomitrella patens (Hedw.) Bruch & Schimp., Physcomitrella patens subsp. patens, Physcomitrium patens, Physcomitrium patens (Hedw.) Mitt.
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